Add unused examples to CMakeLists

examples/CMakeLists.txt

-add_custom_target(examples)
-
-add_amdis_executable(NAME ellipt.2d SOURCES ellipt.cc DIM 2 DOW 2)
-add_amdis_executable(NAME ellipt.3d SOURCES ellipt.cc DIM 3 DOW 3)
-add_dependencies(examples
-  ellipt.2d
-  ellipt.3d)
+file(MAKE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/output)
+file(COPY ${CMAKE_CURRENT_SOURCE_DIR}/macro DESTINATION ${CMAKE_CURRENT_BINARY_DIR})
 
-add_amdis_executable(NAME heat.2d SOURCES heat.cc DIM 2 DOW 2)
-add_amdis_executable(NAME heat.3d SOURCES heat.cc DIM 3 DOW 3)
-add_dependencies(examples
-  heat.2d
-  heat.3d)
+add_custom_target(examples)
 
-add_amdis_executable(NAME vecellipt.2d SOURCES vecellipt.cc DIM 2 DOW 2)
-add_amdis_executable(NAME stokes0.2d SOURCES stokes0.cc DIM 2 DOW 2)
-add_amdis_executable(NAME stokes1.2d SOURCES stokes1.cc DIM 2 DOW 2)
-add_amdis_executable(NAME stokes3.2d SOURCES stokes3.cc DIM 2 DOW 2)
-add_amdis_executable(NAME navier_stokes.2d SOURCES navier_stokes.cc DIM 2 DOW 2)
+add_amdis_executable(NAME boundary.2d             SOURCES boundary.cc             DIM 2 DOW 2)
 add_amdis_executable(NAME convection_diffusion.2d SOURCES convection_diffusion.cc DIM 2 DOW 2)
+add_amdis_executable(NAME ellipt.2d               SOURCES ellipt.cc               DIM 2 DOW 2)
+add_amdis_executable(NAME ellipt.3d               SOURCES ellipt.cc               DIM 3 DOW 3)
+add_amdis_executable(NAME heat.2d                 SOURCES heat.cc                 DIM 2 DOW 2)
+add_amdis_executable(NAME heat.3d                 SOURCES heat.cc                 DIM 3 DOW 3)
+add_amdis_executable(NAME navier_stokes.2d        SOURCES navier_stokes.cc        DIM 2 DOW 2)
+add_amdis_executable(NAME neumann                 SOURCES neumann.cc)
+add_amdis_executable(NAME periodic.2d             SOURCES periodic.cc             DIM 2 DOW 2)
+add_amdis_executable(NAME stokes0.2d              SOURCES stokes0.cc              DIM 2 DOW 2)
+add_amdis_executable(NAME stokes1.2d              SOURCES stokes1.cc              DIM 2 DOW 2)
+add_amdis_executable(NAME stokes3.2d              SOURCES stokes3.cc              DIM 2 DOW 2)
+add_amdis_executable(NAME traversal               SOURCES traversal.cc)
+add_amdis_executable(NAME treecontainer           SOURCES treecontainer.cc)
+add_amdis_executable(NAME vecellipt.2d            SOURCES vecellipt.cc            DIM 2 DOW 2)
 
 add_dependencies(examples
-  vecellipt.2d
+  boundary.2d
+  convection_diffusion.2d
+  ellipt.2d
+  ellipt.3d
+  heat.2d
+  heat.3d
+  navier_stokes.2d
+  neumann
+  periodic.2d
   stokes0.2d
   stokes1.2d
   stokes3.2d
-  navier_stokes.2d
-  convection_diffusion.2d)
+  traversal
+  treecontainer
+  vecellipt.2d
+)
 
 if (ALBERTA_FOUND)
   add_amdis_executable(NAME cahn_hilliard.2d SOURCES cahn_hilliard.cc DIM 2 DOW 2 ALBERTA_GRID)

examples/boundary.cc

@@ -23,7 +23,7 @@ void run(SetBoundary setBoundary)
 {
   ElliptProblem prob("ellipt");
   prob.initialize(INIT_ALL);
-  setBoundary(prob.boundaryManager());
+  setBoundary(*prob.boundaryManager());
 
   auto opL = makeOperator(tag::gradtest_gradtrial{}, 1.0);
   prob.addMatrixOperator(opL);
@@ -61,10 +61,10 @@ void run_periodic()
   using Grid = Dune::YaspGrid<2>;
 #endif
 
-  using Traits = LagrangeBasis<typename Grid::LeafGridView, 2>;
+  using Traits = LagrangeBasis<Grid, 2>;
   ProblemStat<Traits> prob("ellipt", grid);
   prob.initialize(INIT_ALL);
-  prob.boundaryManager().setBoxBoundary({-1,-1,1,1});
+  prob.boundaryManager()->setBoxBoundary({-1,-1,1,1});
 
   auto opL = makeOperator(tag::gradtest_gradtrial{}, 1.0);
   prob.addMatrixOperator(opL);

examples/periodic.cc

@@ -57,12 +57,12 @@ void run(Grid& grid)
 
   ProblemStat<Traits> prob("ellipt", grid);
   prob.initialize(INIT_ALL);
-  prob.boundaryManager().setBoxBoundary({-1,-1,1,1});
+  prob.boundaryManager()->setBoxBoundary({-1,-1,1,1});
 
   print(grid);
 
   using BC = PeriodicBC<FieldVector<double,2>, typename Traits::GlobalBasis::MultiIndex>;
-  BC periodicBC(prob.boundaryManagerPtr(),-1,{{{1.0,0.0}, {0.0,1.0}}, {1.0, 0.0}});
+  BC periodicBC(prob.boundaryManager(),-1,{{{1.0,0.0}, {0.0,1.0}}, {1.0, 0.0}});
 
   periodicBC.init(*prob.globalBasis(), *prob.globalBasis());
   std::cout << "periodicNodes:\n";

examples/surface.cc

@@ -12,7 +12,7 @@
 
 using namespace AMDiS;
 
-using Grid = Dune::FoamGrid<2,3>;
+using Grid = Dune::FoamGrid<GRIDDIM, WORLDDIM>;
 using Basis = LagrangeBasis<Grid, 1>;
 
 struct UnitRadius
@@ -33,7 +33,7 @@ int main(int argc, char** argv)
   std::string gridName = Parameters::get<std::string>("surface->mesh").value();
   std::string gridFileName = Parameters::get<std::string>(gridName + "->macro file name").value();
 
-  using Param = Parametrization<Grid, SphereMapping<2, 3, UnitRadius>>;
+  using Param = Parametrization<Grid, SphereMapping<GRIDDIM, WORLDDIM, UnitRadius>>;
   Dune::GridFactory<Param> gridFactory;
   Dune::AlbertaReader<Param>().readGrid(gridFileName, gridFactory);
   std::unique_ptr<Grid> grid(gridFactory.create());

examples/traversal.cc

@@ -7,8 +7,11 @@
 #include <dune/functions/functionspacebases/lagrangebasis.hh>
 
 using namespace AMDiS;
-int main()
+
+int main(int argc, char** argv)
 {
+  Environment env(argc, argv);
+
   // create grid
   Dune::YaspGrid<2> grid({1.0,1.0}, {1,1});
   auto gridView = grid.leafGridView();
@@ -24,6 +27,6 @@ int main()
 
   for_each_leaf_node(localView.tree(), [](auto const& node, auto const& tp)
   {
-    std::cout << node.tp() << std::endl;
+    std::cout << tp << std::endl;
   });
-}
\ No newline at end of file
+}

examples/treecontainer.cc

@@ -7,8 +7,11 @@
 #include <dune/functions/functionspacebases/lagrangebasis.hh>
 
 using namespace AMDiS;
-int main()
+
+int main(int argc, char** argv)
 {
+  Environment env(argc, argv);
+
   // create grid
   Dune::YaspGrid<2> grid({1.0,1.0}, {1,1});
   auto gridView = grid.leafGridView();
@@ -25,4 +28,4 @@ int main()
   auto container = makeTreeContainer<double>(localView.tree());
   auto container2 = makeTreeContainer(localView.tree(),
     [&](auto const& node) { return makeTreeContainer<double>(localView.tree()); });
-}
\ No newline at end of file
+}