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Commit 64fe2d8a authored by Thomas Witkowski's avatar Thomas Witkowski
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Make use of mtl dense matrizes for parts of the assembling process.

parent b538f51c
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AMDiS/src/AMDiS_fwd.h
View file @ 64fe2d8a
......@@ -54,6 +54,7 @@ namespace AMDiS {
class Operator;
class ProblemInstat;
class ProblemIterationInterface;
class ProblemTimeInterface;
class ProblemVec;
class Projection;
class PreconditionerScal;
......@@ -65,17 +66,20 @@ namespace AMDiS {
class VertexVector;
template<typename ReturnType, typename ArgumentType> class AbstractFunction;
template<typename T> class DOFIndexed;
template<typename T> class DOFVectorBase;
template<typename T> class DOFVector;
template<typename T> class DimVec;
template<typename T> class DimMat;
template<typename ITLSolver> class ITL_OEMSolver;
template<typename T> class ITL_Preconditioner;
template<typename T> class Matrix;
template<typename T> class MatVecMultiplier;
template<typename T> class SolverMatrix;
template<typename T> class Vector;
template<typename T> class WorldVector;
template <typename ITLSolver> class ITL_OEMSolver;
template<typename T> class WorldMatrix;
template<typename T> class VectorOfFixVecs;
} // namespace AMDiS
#endif // AMDIS_AMDIS_FWD_INCLUDE
AMDiS/src/AbstractFunction.h
View file @ 64fe2d8a
......@@ -27,10 +27,6 @@
namespace AMDiS {
// ============================================================================
// ===== class AbstractFunction ===============================================
// ============================================================================
/**
* \ingroup Common
*
......@@ -46,35 +42,25 @@ namespace AMDiS {
class AbstractFunction
{
public:
/** \brief
* Constructor.
*/
/// Constructor.
AbstractFunction(int degree = 0) :
degree_(degree)
{}
virtual ~AbstractFunction() {}
/** \brief
* Returns \ref degree_.
*/
/// Returns \ref degree_.
inline int getDegree() const {
return degree_;
}
/** \brief
* Deligates the evaluation to overriden method f.
*/
/// Deligates the evaluation to overriden method f.
virtual ReturnType operator()(const ArgumentType& x) const = 0;
protected:
int degree_;
};
// ============================================================================
// ===== class BinaryAbstractFunction =========================================
// ============================================================================
/**
* \ingroup Common
*
......@@ -87,25 +73,19 @@ namespace AMDiS {
class BinaryAbstractFunction
{
public:
/** \brief
* Constructor.
*/
/// Constructor.
BinaryAbstractFunction(int degree = 0) :
degree_(degree)
{};
{}
virtual ~BinaryAbstractFunction() {};
virtual ~BinaryAbstractFunction() {}
/** \brief
* Returns \ref degree_.
*/
/// Returns \ref degree_.
inline int getDegree() const {
return degree_;
};
}
/** \brief
* Deligates the evaluation to overriden method f.
*/
/// Deligates the evaluation to overriden method f.
virtual ReturnType operator()(const ArgumentType1& x,
const ArgumentType2& y) const = 0;
......@@ -113,10 +93,6 @@ namespace AMDiS {
int degree_;
};
// ============================================================================
// ===== class TertiaryAbstractFunction =======================================
// ============================================================================
/**
* \ingroup Common
*
......@@ -130,25 +106,19 @@ namespace AMDiS {
class TertiaryAbstractFunction
{
public:
/** \brief
* Constructor.
*/
/// Constructor.
TertiaryAbstractFunction(int degree = 0) :
degree_(degree)
{};
{}
virtual ~TertiaryAbstractFunction() {};
virtual ~TertiaryAbstractFunction() {}
/** \brief
* Returns \ref degree_.
*/
/// Returns \ref degree_.
inline int getDegree() const {
return degree_;
};
}
/** \brief
* function evaluation.
*/
/// function evaluation.
virtual ReturnType operator()(const ArgumentType1& x,
const ArgumentType2& y,
const ArgumentType3& z) const = 0;
......@@ -157,11 +127,6 @@ namespace AMDiS {
int degree_;
};
// ============================================================================
// ===== class QuartAbstractFunction =======================================
// ============================================================================
/**
* \ingroup Common
*
......@@ -176,25 +141,19 @@ namespace AMDiS {
class QuartAbstractFunction
{
public:
/** \brief
* Constructor.
*/
/// Constructor.
QuartAbstractFunction(int degree = 0) :
degree_(degree)
{};
{}
virtual ~QuartAbstractFunction() {};
virtual ~QuartAbstractFunction() {}
/** \brief
* Returns \ref degree_.
*/
/// Returns \ref degree_.
inline int getDegree() const {
return degree_;
};
}
/** \brief
* function evaluation.
*/
/// function evaluation.
virtual ReturnType operator()(const ArgumentType1& x,
const ArgumentType2& y,
const ArgumentType3& z,
......
AMDiS/src/AdaptBase.h
View file @ 64fe2d8a
......@@ -23,17 +23,10 @@
#define AMDIS_ADAPTBASE_H
#include <string>
#include "AMDiS_fwd.h"
namespace AMDiS {
class ProblemIterationInterface;
class ProblemTimeInterface;
class AdaptInfo;
// ============================================================================
// ===== class AdaptBase ======================================================
// ============================================================================
/// Interface for adaption loops.
class AdaptBase
{
......
AMDiS/src/AdaptInfo.h
View file @ 64fe2d8a
......@@ -29,10 +29,6 @@
namespace AMDiS {
// ===========================================================================
// ===== class AdaptInfo =====================================================
// ===========================================================================
/**
* \ingroup Adaption
*
......@@ -49,9 +45,7 @@ namespace AMDiS {
*/
class ScalContent {
public:
/** \brief
* Constructor.
*/
/// Constructor.
ScalContent(std::string prefix)
: est_sum(0.0),
est_t_sum(0.0),
......@@ -86,49 +80,31 @@ namespace AMDiS {
timeErrLow = totalTol * relTimeErr * timeTheta2;
}
/** \brief
* Sum of all error estimates
*/
/// Sum of all error estimates
double est_sum;
/** \brief
* Sum of all time error estimates
*/
/// Sum of all time error estimates
double est_t_sum;
/** \brief
* maximal local error estimate.
*/
/// maximal local error estimate.
double est_max;
/** \brief
* Maximum of all time error estimates
*/
/// Maximum of all time error estimates
double est_t_max;
/** \brief
* Tolerance for the (absolute or relative) error
*/
/// Tolerance for the (absolute or relative) error
double spaceTolerance;
/** \brief
* Time tolerance.
*/
/// Time tolerance.
double timeTolerance;
/** \brief
* Lower bound for the time error.
*/
/// Lower bound for the time error.
double timeErrLow;
/** \brief
* true if coarsening is allowed, false otherwise.
*/
/// true if coarsening is allowed, false otherwise.
int coarsenAllowed;
/** \brief
* true if refinement is allowed, false otherwise.
*/
/// true if refinement is allowed, false otherwise.
int refinementAllowed;
/** \brief
......@@ -136,20 +112,18 @@ namespace AMDiS {
* performed when an element is marked for refinement; usually the value is
* 1 or DIM
*/
int refineBisections;
int refineBisections;
/** \brief
* parameter to tell the marking strategy how many bisections should
* be undone when an element is marked for coarsening; usually the value is
* 1 or DIM
*/
int coarseBisections;
int coarseBisections;
};
public:
/** \brief
* Constructor.
*/
/// Constructor.
AdaptInfo(std::string name_, int size = 1)
: name(name_),
spaceIteration(-1),
......@@ -197,13 +171,10 @@ namespace AMDiS {
}
}
/** \brief
* Destructor.
*/
/// Destructor.
virtual ~AdaptInfo() {
for (int i = 0; i < scalContents.getSize(); i++) {
for (int i = 0; i < scalContents.getSize(); i++)
delete scalContents[i];
}
}
inline void reset()
......@@ -220,185 +191,135 @@ namespace AMDiS {
GET_PARAMETER(0, name + "->timestep", "%f", &timestep);
}
/** \brief
* Returns whether space tolerance is reached.
*/
/// Returns whether space tolerance is reached.
virtual bool spaceToleranceReached() {
int size = scalContents.getSize();
for (int i = 0; i < size; i++) {
if (!(scalContents[i]->est_sum < scalContents[i]->spaceTolerance)) {
for (int i = 0; i < size; i++)
if (!(scalContents[i]->est_sum < scalContents[i]->spaceTolerance))
return false;
}
}
return true;
}
/** \brief
* Returns whether space tolerance of component i is reached.
*/
/// Returns whether space tolerance of component i is reached.
virtual bool spaceToleranceReached(int i) {
if (!(scalContents[i]->est_sum < scalContents[i]->spaceTolerance)) {
if (!(scalContents[i]->est_sum < scalContents[i]->spaceTolerance))
return false;
} else {
else
return true;
}
}
/** \brief
* Returns whether time tolerance is reached.
*/
/// Returns whether time tolerance is reached.
virtual bool timeToleranceReached() {
int size = scalContents.getSize();
for (int i = 0; i < size; i++) {
if (!(scalContents[i]->est_t_sum < scalContents[i]->timeTolerance)) {
for (int i = 0; i < size; i++)
if (!(scalContents[i]->est_t_sum < scalContents[i]->timeTolerance))
return false;
}
}
return true;
}
/** \brief
* Returns whether time tolerance of component i is reached.
*/
/// Returns whether time tolerance of component i is reached.
virtual bool timeToleranceReached(int i) {
if (!(scalContents[i]->est_t_sum < scalContents[i]->timeTolerance)) {
if (!(scalContents[i]->est_t_sum < scalContents[i]->timeTolerance))
return false;
} else {
else
return true;
}
}
/** \brief
* Returns whether time error is under its lower bound.
*/
/// Returns whether time error is under its lower bound.
virtual bool timeErrorLow() {
int size = scalContents.getSize();
for (int i = 0; i < size; i++) {
if (!(scalContents[i]->est_t_sum < scalContents[i]->timeErrLow)) {
for (int i = 0; i < size; i++)
if (!(scalContents[i]->est_t_sum < scalContents[i]->timeErrLow))
return false;
}
}
return true;
}
/** \brief
* Print debug information about time error and its bound.
*/
/// Print debug information about time error and its bound.
void printTimeErrorLowInfo() {
for (int i = 0; i < scalContents.getSize(); i++) {
for (int i = 0; i < scalContents.getSize(); i++)
std::cout << " Time error estimate = " << scalContents[i]->est_t_sum
<< " Time error bound = " << scalContents[i]->timeErrLow << "\n";
}
}
/** \brief
* Returns \ref spaceIteration.
*/
/// Returns \ref spaceIteration.
inline int getSpaceIteration() {
return spaceIteration;
}
/** \brief
* Sets \ref spaceIteration.
*/
/// Sets \ref spaceIteration.
inline void setSpaceIteration(int it) {
spaceIteration = it;
}
/** \brief
* Returns \ref maxSpaceIteration.
*/
/// Returns \ref maxSpaceIteration.
inline int getMaxSpaceIteration() {
return maxSpaceIteration;
}
/** \brief
* Sets \ref maxSpaceIteration.
*/
/// Sets \ref maxSpaceIteration.
inline void setMaxSpaceIteration(int it) {
maxSpaceIteration = it;
}
/** \brief
* Increments \ref spaceIteration by 1;
*/
/// Increments \ref spaceIteration by 1;
inline void incSpaceIteration() {
spaceIteration++;
}
/** \brief
* Sets \ref timestepIteration.
*/
/// Sets \ref timestepIteration.
inline void setTimestepIteration(int it) {
timestepIteration = it;
}
/** \brief
* Returns \ref timestepIteration.
*/
/// Returns \ref timestepIteration.
inline int getTimestepIteration() {
return timestepIteration;
}
/** \brief
* Increments \ref timestepIteration by 1;
*/
/// Increments \ref timestepIteration by 1;
inline void incTimestepIteration() {
timestepIteration++;
}
/** \brief
* Returns \ref maxTimestepIteration.
*/
/// Returns \ref maxTimestepIteration.
inline int getMaxTimestepIteration() {
return maxTimestepIteration;
}
/** \brief
* Sets \ref maxTimestepIteration.
*/
/// Sets \ref maxTimestepIteration.
inline void setMaxTimestepIteration(int it) {
maxTimestepIteration = it;
}
/** \brief
* Sets \ref timeIteration.
*/
/// Sets \ref timeIteration.
inline void setTimeIteration(int it) {
timeIteration = it;
}
/** \brief
* Returns \ref timeIteration.
*/
/// Returns \ref timeIteration.
inline int getTimeIteration() {
return timeIteration;
}
/** \brief
* Increments \ref timesIteration by 1;
*/
/// Increments \ref timesIteration by 1;
inline void incTimeIteration() {
timeIteration++;
}
/** \brief
* Returns \ref maxTimeIteration.
*/
/// Returns \ref maxTimeIteration.
inline int getMaxTimeIteration() {
return maxTimeIteration;
}
/** \brief
* Sets \ref maxTimeIteration.
*/
/// Sets \ref maxTimeIteration.
inline void setMaxTimeIteration(int it) {
maxTimeIteration = it;
}
/** \brief
* Returns \ref timestepNumber.
*/
/// Returns \ref timestepNumber.
inline int getTimestepNumber() {
return timestepNumber;
}
......@@ -408,100 +329,72 @@ namespace AMDiS {
return nTimesteps;
}
/** \brief
* Increments \ref timestepNumber by 1;
*/
/// Increments \ref timestepNumber by 1;
inline void incTimestepNumber() {
timestepNumber++;
}
/** \brief
* Sets \ref est_sum.
*/
/// Sets \ref est_sum.
inline void setEstSum(double e, int index) {
scalContents[index]->est_sum = e;
}
/** \brief
* Sets \ref est_max.
*/
/// Sets \ref est_max.
inline void setEstMax(double e, int index) {
scalContents[index]->est_max = e;
}
/** \brief
* Sets \ref est_max.
*/
/// Sets \ref est_max.
inline void setTimeEstMax(double e, int index) {
scalContents[index]->est_t_max = e;
}
/** \brief
* Sets \ref est_t_sum.
*/
/// Sets \ref est_t_sum.
inline void setTimeEstSum(double e, int index) {
scalContents[index]->est_t_sum = e;
}
/** \brief
* Returns \ref est_sum.
*/
/// Returns \ref est_sum.
inline double getEstSum(int index) {
return scalContents[index]->est_sum;
}
/** \brief
* Returns \ref est_t_sum.
*/
/// Returns \ref est_t_sum.
inline double getEstTSum(int index) {
return scalContents[index]->est_t_sum;
}
/** \brief
* Returns \ref est_max.
*/
/// Returns \ref est_max.
inline double getEstMax(int index) {
return scalContents[index]->est_max;
}
/** \brief
* Returns \ref est_max.
*/
/// Returns \ref est_max.
inline double getTimeEstMax(int index) {
return scalContents[index]->est_t_max;
}
/** \brief
* Returns \ref est_t_sum.
*/
/// Returns \ref est_t_sum.
inline double