From 99ad7c0822b169e64a3c4348628ab00fdacf3919 Mon Sep 17 00:00:00 2001
From: Thomas Witkowski <thomas.witkowski@gmx.de>
Date: Mon, 4 Jan 2010 09:26:31 +0000
Subject: [PATCH] Merged two AMDiS directories, no changes.
---
AMDiS/libtool | 85 +++++++++++++++-------------------
AMDiS/src/DOFAdmin.cc | 11 +++--
AMDiS/src/DOFVector.h | 8 ++--
AMDiS/src/DOFVector.hh | 14 +++---
AMDiS/src/MacroReader.cc | 22 ++++++---
AMDiS/src/Mesh.cc | 8 ++--
AMDiS/src/ParallelDomainVec.cc | 4 ++
7 files changed, 81 insertions(+), 71 deletions(-)
diff --git a/AMDiS/libtool b/AMDiS/libtool
index e96f6706..486eabd3 100755
--- a/AMDiS/libtool
+++ b/AMDiS/libtool
@@ -30,10 +30,10 @@
# the same distribution terms that you use for the rest of that program.
# A sed program that does not truncate output.
-SED="/bin/sed"
+SED="/usr/bin/sed"
# Sed that helps us avoid accidentally triggering echo(1) options like -n.
-Xsed="/bin/sed -e 1s/^X//"
+Xsed="/usr/bin/sed -e 1s/^X//"
# The HP-UX ksh and POSIX shell print the target directory to stdout
# if CDPATH is set.
@@ -44,7 +44,7 @@ available_tags=" CXX F77"
# ### BEGIN LIBTOOL CONFIG
-# Libtool was configured on host NWRW15:
+# Libtool was configured on host deimos103:
# Shell to use when invoking shell scripts.
SHELL="/bin/sh"
@@ -66,12 +66,12 @@ fast_install=yes
# The host system.
host_alias=
-host=i686-pc-linux-gnu
+host=x86_64-unknown-linux-gnu
host_os=linux-gnu
# The build system.
build_alias=
-build=i686-pc-linux-gnu
+build=x86_64-unknown-linux-gnu
build_os=linux-gnu
# An echo program that does not interpret backslashes.
@@ -82,25 +82,22 @@ AR="ar"
AR_FLAGS="cru"
# A C compiler.
-LTCC="gcc"
+LTCC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc"
# LTCC compiler flags.
LTCFLAGS="-g -O2"
# A language-specific compiler.
-CC="gcc"
+CC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc"
# Is the compiler the GNU C compiler?
with_gcc=yes
-gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'`
-gcc_ver=`gcc -dumpversion`
-
# An ERE matcher.
EGREP="grep -E"
# The linker used to build libraries.
-LD="/usr/bin/ld"
+LD="/usr/x86_64-suse-linux/bin/ld -m elf_x86_64"
# Whether we need hard or soft links.
LN_S="ln -s"
@@ -174,7 +171,7 @@ dlopen_self=unknown
dlopen_self_static=unknown
# Compiler flag to prevent dynamic linking.
-link_static_flag="-static"
+link_static_flag=""
# Compiler flag to turn off builtin functions.
no_builtin_flag=" -fno-builtin"
@@ -232,11 +229,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# shared library.
-predep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+predep_objects=""
# Dependencies to place after the objects being linked to create a
# shared library.
-postdep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+postdep_objects=""
# Dependencies to place before the objects being linked to create a
# shared library.
@@ -248,7 +245,7 @@ postdeps=""
# The library search path used internally by the compiler when linking
# a shared library.
-compiler_lib_search_path=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+compiler_lib_search_path=""
# Method to check whether dependent libraries are shared objects.
deplibs_check_method="pass_all"
@@ -328,10 +325,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown
# Compile-time system search path for libraries
-sys_lib_search_path_spec=`echo " /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+sys_lib_search_path_spec=" /usr/lib64/gcc/x86_64-suse-linux/4.1.2/ /usr/lib/gcc/x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/../lib64/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/ /lib/x86_64-suse-linux/4.1.2/ /lib/../lib64/ /usr/lib/x86_64-suse-linux/4.1.2/ /usr/lib/../lib64/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../ /lib/ /usr/lib/"
# Run-time system search path for libraries
-sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib "
+sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso "
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path=""
@@ -6763,7 +6760,7 @@ build_old_libs=`case $build_libtool_libs in yes) $echo no;; *) $echo yes;; esac`
# End:
# ### BEGIN LIBTOOL TAG CONFIG: CXX
-# Libtool was configured on host NWRW15:
+# Libtool was configured on host deimos103:
# Shell to use when invoking shell scripts.
SHELL="/bin/sh"
@@ -6785,12 +6782,12 @@ fast_install=yes
# The host system.
host_alias=
-host=i686-pc-linux-gnu
+host=x86_64-unknown-linux-gnu
host_os=linux-gnu
# The build system.
build_alias=
-build=i686-pc-linux-gnu
+build=x86_64-unknown-linux-gnu
build_os=linux-gnu
# An echo program that does not interpret backslashes.
@@ -6801,25 +6798,22 @@ AR="ar"
AR_FLAGS="cru"
# A C compiler.
-LTCC="gcc"
+LTCC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc"
# LTCC compiler flags.
LTCFLAGS="-g -O2"
# A language-specific compiler.
-CC="g++"
+CC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpiCC"
# Is the compiler the GNU C compiler?
with_gcc=yes
-gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'`
-gcc_ver=`gcc -dumpversion`
-
# An ERE matcher.
EGREP="grep -E"
# The linker used to build libraries.
-LD="/usr/bin/ld"
+LD="/usr/x86_64-suse-linux/bin/ld -m elf_x86_64"
# Whether we need hard or soft links.
LN_S="ln -s"
@@ -6893,7 +6887,7 @@ dlopen_self=unknown
dlopen_self_static=unknown
# Compiler flag to prevent dynamic linking.
-link_static_flag="-static"
+link_static_flag=""
# Compiler flag to turn off builtin functions.
no_builtin_flag=" -fno-builtin"
@@ -6948,11 +6942,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# shared library.
-predep_objects=`echo "/usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crti.o /usr/lib/gcc/i386-redhat-linux/4.1.2/crtbeginS.o" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+predep_objects="/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/crti.o /usr/lib64/gcc/x86_64-suse-linux/4.1.2/crtbeginS.o"
# Dependencies to place after the objects being linked to create a
# shared library.
-postdep_objects=`echo "/usr/lib/gcc/i386-redhat-linux/4.1.2/crtendS.o /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crtn.o" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+postdep_objects="/usr/lib64/gcc/x86_64-suse-linux/4.1.2/crtendS.o /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/crtn.o"
# Dependencies to place before the objects being linked to create a
# shared library.
@@ -6960,11 +6954,11 @@ predeps=""
# Dependencies to place after the objects being linked to create a
# shared library.
-postdeps="-lstdc++ -lm -lgcc_s -lc -lgcc_s"
+postdeps="-lmpi_cxx -lmpi -lopen-rte -lopen-pal -libverbs -lrt -lnuma -ldl -lnsl -lutil -ldl -lstdc++ -lm -lgcc_s -lpthread -lc -lgcc_s"
# The library search path used internally by the compiler when linking
# a shared library.
-compiler_lib_search_path=`echo "-L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2/../../.." | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+compiler_lib_search_path="-L/usr/lib64 -L/licsoft/libraries/openmpi/1.2.6/64bit/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2 -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../.."
# Method to check whether dependent libraries are shared objects.
deplibs_check_method="pass_all"
@@ -7044,10 +7038,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown
# Compile-time system search path for libraries
-sys_lib_search_path_spec=`echo " /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+sys_lib_search_path_spec=" /usr/lib64/gcc/x86_64-suse-linux/4.1.2/ /usr/lib/gcc/x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/../lib64/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../x86_64-suse-linux/4.1.2/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../lib64/ /lib/x86_64-suse-linux/4.1.2/ /lib/../lib64/ /usr/lib/x86_64-suse-linux/4.1.2/ /usr/lib/../lib64/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../../x86_64-suse-linux/lib/ /usr/lib64/gcc/x86_64-suse-linux/4.1.2/../../../ /lib/ /usr/lib/"
# Run-time system search path for libraries
-sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib "
+sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso "
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path=""
@@ -7071,7 +7065,7 @@ include_expsyms=""
# ### BEGIN LIBTOOL TAG CONFIG: F77
-# Libtool was configured on host NWRW15:
+# Libtool was configured on host deimos103:
# Shell to use when invoking shell scripts.
SHELL="/bin/sh"
@@ -7093,12 +7087,12 @@ fast_install=yes
# The host system.
host_alias=
-host=i686-pc-linux-gnu
+host=x86_64-unknown-linux-gnu
host_os=linux-gnu
# The build system.
build_alias=
-build=i686-pc-linux-gnu
+build=x86_64-unknown-linux-gnu
build_os=linux-gnu
# An echo program that does not interpret backslashes.
@@ -7109,7 +7103,7 @@ AR="ar"
AR_FLAGS="cru"
# A C compiler.
-LTCC="gcc"
+LTCC="/licsoft/libraries/openmpi/1.2.6/64bit/bin/mpicc"
# LTCC compiler flags.
LTCFLAGS="-g -O2"
@@ -7118,16 +7112,13 @@ LTCFLAGS="-g -O2"
CC="g77"
# Is the compiler the GNU C compiler?
-with_gcc=yes
-
-gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'`
-gcc_ver=`gcc -dumpversion`
+with_gcc=
# An ERE matcher.
EGREP="grep -E"
# The linker used to build libraries.
-LD="/usr/bin/ld"
+LD="/usr/x86_64-suse-linux/bin/ld -m elf_x86_64"
# Whether we need hard or soft links.
LN_S="ln -s"
@@ -7259,11 +7250,11 @@ striplib="strip --strip-unneeded"
# Dependencies to place before the objects being linked to create a
# shared library.
-predep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+predep_objects=""
# Dependencies to place after the objects being linked to create a
# shared library.
-postdep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+postdep_objects=""
# Dependencies to place before the objects being linked to create a
# shared library.
@@ -7275,7 +7266,7 @@ postdeps=""
# The library search path used internally by the compiler when linking
# a shared library.
-compiler_lib_search_path=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+compiler_lib_search_path=""
# Method to check whether dependent libraries are shared objects.
deplibs_check_method="pass_all"
@@ -7355,10 +7346,10 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM
link_all_deplibs=unknown
# Compile-time system search path for libraries
-sys_lib_search_path_spec=`echo " /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../ /lib/i386-redhat-linux/3.4.6/ /lib/ /usr/lib/i386-redhat-linux/3.4.6/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"`
+sys_lib_search_path_spec=" /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/ /usr/lib/gcc/x86_64-suse-linux/3.3.5/ /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/../../../../x86_64-suse-linux/lib/x86_64-suse-linux/3.3.5/ /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/../../../../x86_64-suse-linux/lib/ /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/../../../x86_64-suse-linux/3.3.5/ /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.5/../../../ /lib/x86_64-suse-linux/3.3.5/ /lib/ /usr/lib/x86_64-suse-linux/3.3.5/ /usr/lib/"
# Run-time system search path for libraries
-sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib "
+sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/X11R6/lib64/Xaw3d /usr/X11R6/lib64 /usr/X11R6/lib/Xaw3d /usr/X11R6/lib /usr/x86_64-suse-linux/lib /usr/local/lib64 /usr/local/lib /opt/kde3/lib64 /opt/kde3/lib /opt/gnome/lib64 /opt/gnome/lib /lib64 /lib /usr/lib64 /usr/lib /opt/cluster/intel/cce/9.1.042/lib /opt/cluster/intel/fce/9.1.036/lib /opt/cluster/Pathscale3.0/lib/2.9.99 /opt/cluster/Pathscale3.0/lib/2.9.99/32 /work/licsoft/compilers/pgi/linux86-64/6.2/lib /work/licsoft/compilers/pgi/linux86-64/6.2/libso "
# Fix the shell variable $srcfile for the compiler.
fix_srcfile_path=""
diff --git a/AMDiS/src/DOFAdmin.cc b/AMDiS/src/DOFAdmin.cc
index 6d06c7d8..4f1be2a0 100755
--- a/AMDiS/src/DOFAdmin.cc
+++ b/AMDiS/src/DOFAdmin.cc
@@ -124,7 +124,7 @@ namespace AMDiS {
int dof = 0;
// if there is a hole
- if (firstHole < static_cast<int>(dofFree.size())) {
+ if (firstHole < static_cast<int>(dofFree.size())) {
TEST_EXIT_DBG(dofFree[firstHole])("no hole at firstHole!\n");
// its no longer a hole
dofFree[firstHole] = false;
@@ -140,6 +140,7 @@ namespace AMDiS {
} else { // if there is no hole
// enlarge dof-list
enlargeDOFLists(0);
+
TEST_EXIT_DBG(firstHole < static_cast<int>(dofFree.size()))
("no free entry after enlargeDOFLists\n");
TEST_EXIT_DBG(dofFree[firstHole])("no free bit at firstHole\n");
@@ -153,7 +154,7 @@ namespace AMDiS {
holeCount--;
sizeUsed = max(sizeUsed, dof + 1);
- return(dof);
+ return dof;
}
void DOFAdmin::enlargeDOFLists(int minsize)
@@ -179,8 +180,10 @@ namespace AMDiS {
std::list<DOFIndexedBase*>::iterator di;
for (di = dofIndexedList.begin(); di != dofIndexedList.end(); ++di)
- if ((*di)->getSize() < newval)
- (*di)->resize(newval);
+ if ((*di)->getSize() < newval) {
+ (*di)->resize(newval);
+ std::cout << "RESIE WITH " << (*di)->getSize() << " " << newval << std::endl;
+ }
}
void DOFAdmin::addDOFIndexed(DOFIndexedBase* dofIndexed)
diff --git a/AMDiS/src/DOFVector.h b/AMDiS/src/DOFVector.h
index de10fc95..c0ffe79c 100644
--- a/AMDiS/src/DOFVector.h
+++ b/AMDiS/src/DOFVector.h
@@ -419,7 +419,7 @@ namespace AMDiS {
inline void resize(int n)
{
FUNCNAME("DOFVector<T>::resize()");
- TEST_EXIT_DBG((n >= 0))("Can't resize DOFVector to negative size\n");
+ TEST_EXIT_DBG(n >= 0)("Can't resize DOFVector to negative size\n");
vec.resize(n);
}
@@ -427,7 +427,7 @@ namespace AMDiS {
inline void resize(int n, T init)
{
FUNCNAME("DOFVector<T>::resize()");
- TEST_EXIT_DBG((n >= 0))("Can't resize DOFVector to negative size\n");
+ TEST_EXIT_DBG(n >= 0)("Can't resize DOFVector to negative size\n");
vec.resize(n, init);
}
@@ -435,7 +435,7 @@ namespace AMDiS {
inline const T& operator[](DegreeOfFreedom i) const
{
FUNCNAME("DOFVector<T>::operator[]");
- TEST_EXIT_DBG((i>= 0) && (i < static_cast<int>(vec.size())))
+ TEST_EXIT_DBG(i >= 0 && i < static_cast<int>(vec.size()))
("Illegal vector index %d.\n",i);
return vec[i];
}
@@ -444,7 +444,7 @@ namespace AMDiS {
inline T& operator[](DegreeOfFreedom i)
{
FUNCNAME("DOFVector<T>::operator[]");
- TEST_EXIT_DBG((i >= 0) && (i < static_cast<int>(vec.size())))
+ TEST_EXIT_DBG(i >= 0 && i < static_cast<int>(vec.size()))
("Illegal vector index %d.\n",i);
return vec[i];
}
diff --git a/AMDiS/src/DOFVector.hh b/AMDiS/src/DOFVector.hh
index 303bfcb1..7b07936c 100644
--- a/AMDiS/src/DOFVector.hh
+++ b/AMDiS/src/DOFVector.hh
@@ -71,9 +71,10 @@ namespace AMDiS {
DOFVectorBase<T>::DOFVectorBase(const FiniteElemSpace *f, std::string n)
: feSpace(f),
name(n),
- elementVector(f->getBasisFcts()->getNumber()),
+ // elementVector(f->getBasisFcts()->getNumber()),
boundaryManager(NULL)
{
+ /*
nBasFcts = feSpace->getBasisFcts()->getNumber();
dim = feSpace->getMesh()->getDim();
@@ -90,6 +91,7 @@ namespace AMDiS {
grdTmp[i] = new DimVec<double>(dim, DEFAULT_VALUE, 0.0);
D2Phis[i] = new DimMat<double>(dim, NO_INIT);
}
+ */
}
template<typename T>
@@ -116,11 +118,11 @@ namespace AMDiS {
template<typename T>
void DOFVector<T>::init(const FiniteElemSpace* f, std::string n)
{
- this->name = n;
- this->feSpace = f;
- if (this->feSpace && this->feSpace->getAdmin())
- (this->feSpace->getAdmin())->addDOFIndexed(this);
- this->boundaryManager = new BoundaryManager(f);
+// this->name = n;
+// this->feSpace = f;
+// if (this->feSpace && this->feSpace->getAdmin())
+// (this->feSpace->getAdmin())->addDOFIndexed(this);
+// this->boundaryManager = new BoundaryManager(f);
}
template<typename T>
diff --git a/AMDiS/src/MacroReader.cc b/AMDiS/src/MacroReader.cc
index 6ac3230e..8062e913 100644
--- a/AMDiS/src/MacroReader.cc
+++ b/AMDiS/src/MacroReader.cc
@@ -33,6 +33,7 @@ namespace AMDiS {
MacroInfo *macroInfo = new MacroInfo();
macroInfo->readAMDiSMacro(filename, mesh);
+#if 0
std::deque<MacroElement*>::iterator mel = macroInfo->mel.begin();
int **melVertex = macroInfo->mel_vertex;
WorldVector<double> *coords = macroInfo->coords;
@@ -244,9 +245,8 @@ namespace AMDiS {
}
}
- if (!macroInfo->bound_set) {
+ if (!macroInfo->bound_set)
macroInfo->dirichletBoundary();
- }
if (mesh->getDim() > 1)
boundaryDOFs(mesh);
@@ -315,6 +315,7 @@ namespace AMDiS {
macroTest(mesh, filenew);
}
}
+#endif
return macroInfo;
}
@@ -352,6 +353,10 @@ namespace AMDiS {
for (int i = 0; i < nv; i++)
dof[i] = mesh->getDOF(VERTEX);
+ std::cout << "REMOVE THIS RETURN!" << std::endl;
+
+ return;
+
for (int i = 0; i < ne; i++) {
mel[i]->element = mesh->createNewElement();
mel[i]->index = i;
@@ -493,7 +498,6 @@ namespace AMDiS {
}
fclose(file);
-
/*******************************************************************************/
/* Test, if there is data for every key and if all is defined in right order. */
/*******************************************************************************/
@@ -582,8 +586,12 @@ namespace AMDiS {
("number of vertices = %d must be bigger than 0\n", nv);
key_def[2] = true;
- if (key_def[3])
- fill(mesh, ne, nv);
+ if (key_def[3])
+ fill(mesh, ne, nv);
+
+ std::cout << "REMOVE THIS RETURN" << std::endl;
+ return;
+
break;
case 3:
@@ -659,7 +667,7 @@ namespace AMDiS {
key_def[6] = true;
break;
- case 7:
+ case 7:
// block "element neighbours"
fscanf(file, "%*s %*s");
@@ -802,6 +810,8 @@ namespace AMDiS {
}
}
+ return;
+
if (ind)
delete ind;
diff --git a/AMDiS/src/Mesh.cc b/AMDiS/src/Mesh.cc
index 9a009ca0..b676d557 100644
--- a/AMDiS/src/Mesh.cc
+++ b/AMDiS/src/Mesh.cc
@@ -1125,13 +1125,13 @@ namespace AMDiS {
if (macroFilename.length()) {
macroFileInfo = MacroReader::readMacro(macroFilename.c_str(), this,
- periodicFile == "" ? NULL : periodicFile.c_str(),
- check);
+ periodicFile == "" ? NULL : periodicFile.c_str(),
+ check);
// If there is no value file which should be written, we can delete
// the information of the macro file.
- if (!valueFilename.length())
- clearMacroFileInfo();
+// if (!valueFilename.length())
+// clearMacroFileInfo();
}
initialized = true;
diff --git a/AMDiS/src/ParallelDomainVec.cc b/AMDiS/src/ParallelDomainVec.cc
index 54fed899..47a89498 100644
--- a/AMDiS/src/ParallelDomainVec.cc
+++ b/AMDiS/src/ParallelDomainVec.cc
@@ -54,8 +54,12 @@ namespace AMDiS {
{
FUNCNAME("ParallelDomainVec::initParallelization()");
+ std::cout << "TEST RHS 1 " << probVec->getRHS()->getDOFVector(0) << ": " << probVec->getRHS()->getDOFVector(0)->getCoarsenOperation() << std::endl;
+
ParallelDomainBase::initParallelization(adaptInfo);
+ std::cout << "TEST RHS 2 " << probVec->getRHS()->getDOFVector(0) << ": " << probVec->getRHS()->getDOFVector(0)->getCoarsenOperation() << std::endl;
+
for (int i = 0; i < nComponents; i++) {
for (int j = 0; j < nComponents; j++)
if (probVec->getSystemMatrix(i, j))
--
GitLab