From e378e1c0186d048e97a7fd2470440e2055aeeb3c Mon Sep 17 00:00:00 2001 From: Thomas Witkowski <thomas.witkowski@gmx.de> Date: Mon, 26 Apr 2010 10:36:07 +0000 Subject: [PATCH] Some performance improvements for 3d mesh traverse. --- AMDiS/Makefile.in | 1 + AMDiS/aclocal.m4 | 34 +++++-- AMDiS/bin/Makefile.in | 1 + AMDiS/configure | 208 +++++++++++++++++++++++++++++++----------- AMDiS/libtool | 33 ++++--- AMDiS/src/ElInfo3d.cc | 72 ++++++--------- AMDiS/src/ElInfo3d.h | 6 +- 7 files changed, 239 insertions(+), 116 deletions(-) diff --git a/AMDiS/Makefile.in b/AMDiS/Makefile.in index e9c5bf1a..e7566807 100644 --- a/AMDiS/Makefile.in +++ b/AMDiS/Makefile.in @@ -140,6 +140,7 @@ PACKAGE_VERSION = @PACKAGE_VERSION@ PATH_SEPARATOR = @PATH_SEPARATOR@ PETSC_DIR = @PETSC_DIR@ RANLIB = @RANLIB@ +SED = @SED@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ STRIP = @STRIP@ diff --git a/AMDiS/aclocal.m4 b/AMDiS/aclocal.m4 index c6b83dae..6cec4be8 100644 --- a/AMDiS/aclocal.m4 +++ b/AMDiS/aclocal.m4 @@ -1578,10 +1578,27 @@ linux*) # before this can be enabled. hardcode_into_libs=yes + # find out which ABI we are using + libsuff= + case "$host_cpu" in + x86_64*|s390x*|powerpc64*) + echo '[#]line __oline__ "configure"' > conftest.$ac_ext + if AC_TRY_EVAL(ac_compile); then + case `/usr/bin/file conftest.$ac_objext` in + *64-bit*) + libsuff=64 + sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}" + ;; + esac + fi + rm -rf conftest* + ;; + esac + # Append ld.so.conf contents to the search path if test -f /etc/ld.so.conf; then - lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` - sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra" + lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` + sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra" fi # We used to test for /lib/ld.so.1 and disable shared libraries on @@ -4288,6 +4305,9 @@ CC=$lt_[]_LT_AC_TAGVAR(compiler, $1) # Is the compiler the GNU C compiler? with_gcc=$_LT_AC_TAGVAR(GCC, $1) +gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\` +gcc_ver=\`gcc -dumpversion\` + # An ERE matcher. EGREP=$lt_EGREP @@ -4421,11 +4441,11 @@ striplib=$lt_striplib # Dependencies to place before the objects being linked to create a # shared library. -predep_objects=$lt_[]_LT_AC_TAGVAR(predep_objects, $1) +predep_objects=\`echo $lt_[]_LT_AC_TAGVAR(predep_objects, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects=$lt_[]_LT_AC_TAGVAR(postdep_objects, $1) +postdep_objects=\`echo $lt_[]_LT_AC_TAGVAR(postdep_objects, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place before the objects being linked to create a # shared library. @@ -4437,7 +4457,7 @@ postdeps=$lt_[]_LT_AC_TAGVAR(postdeps, $1) # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path=$lt_[]_LT_AC_TAGVAR(compiler_lib_search_path, $1) +compiler_lib_search_path=\`echo $lt_[]_LT_AC_TAGVAR(compiler_lib_search_path, $1) | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Method to check whether dependent libraries are shared objects. deplibs_check_method=$lt_deplibs_check_method @@ -4517,7 +4537,7 @@ variables_saved_for_relink="$variables_saved_for_relink" link_all_deplibs=$_LT_AC_TAGVAR(link_all_deplibs, $1) # Compile-time system search path for libraries -sys_lib_search_path_spec=$lt_sys_lib_search_path_spec +sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Run-time system search path for libraries sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec @@ -6353,6 +6373,7 @@ do done done done +IFS=$as_save_IFS lt_ac_max=0 lt_ac_count=0 # Add /usr/xpg4/bin/sed as it is typically found on Solaris @@ -6385,6 +6406,7 @@ for lt_ac_sed in $lt_ac_sed_list /usr/xpg4/bin/sed; do done ]) SED=$lt_cv_path_SED +AC_SUBST([SED]) AC_MSG_RESULT([$SED]) ]) diff --git a/AMDiS/bin/Makefile.in b/AMDiS/bin/Makefile.in index 8ce57a54..7580d8fa 100644 --- a/AMDiS/bin/Makefile.in +++ b/AMDiS/bin/Makefile.in @@ -414,6 +414,7 @@ PACKAGE_VERSION = @PACKAGE_VERSION@ PATH_SEPARATOR = @PATH_SEPARATOR@ PETSC_DIR = @PETSC_DIR@ RANLIB = @RANLIB@ +SED = @SED@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ STRIP = @STRIP@ diff --git a/AMDiS/configure b/AMDiS/configure index b4b86c5b..5d40cff8 100755 --- a/AMDiS/configure +++ b/AMDiS/configure @@ -462,7 +462,7 @@ ac_includes_default="\ # include <unistd.h> #endif" -ac_subst_vars='SHELL PATH_SEPARATOR PACKAGE_NAME PACKAGE_TARNAME PACKAGE_VERSION PACKAGE_STRING PACKAGE_BUGREPORT exec_prefix prefix program_transform_name bindir sbindir libexecdir datadir sysconfdir sharedstatedir localstatedir libdir includedir oldincludedir infodir mandir build_alias host_alias target_alias DEFS ECHO_C ECHO_N ECHO_T LIBS INSTALL_PROGRAM INSTALL_SCRIPT INSTALL_DATA CYGPATH_W PACKAGE VERSION ACLOCAL AUTOCONF AUTOMAKE AUTOHEADER MAKEINFO install_sh STRIP ac_ct_STRIP INSTALL_STRIP_PROGRAM mkdir_p AWK SET_MAKE am__leading_dot AMTAR am__tar am__untar MAINTAINER_MODE_TRUE MAINTAINER_MODE_FALSE MAINT AMDIS_DEBUG_TRUE AMDIS_DEBUG_FALSE CXX CC AMDIS_INTEL_TRUE AMDIS_INTEL_FALSE AMDIS_OPENMP_TRUE AMDIS_OPENMP_FALSE OPENMP_FLAG MPI_DIR PETSC_DIR USE_PARALLEL_AMDIS_TRUE USE_PARALLEL_AMDIS_FALSE USE_PARALLEL_DOMAIN_AMDIS_TRUE USE_PARALLEL_DOMAIN_AMDIS_FALSE ENABLE_UMFPACK_TRUE ENABLE_UMFPACK_FALSE ENABLE_MKL_TRUE ENABLE_MKL_FALSE DUNE_DIR ENABLE_DUNE_TRUE ENABLE_DUNE_FALSE ENABLE_BOOST_TRUE ENABLE_BOOST_FALSE CFLAGS LDFLAGS CPPFLAGS ac_ct_CC EXEEXT OBJEXT DEPDIR am__include am__quote AMDEP_TRUE AMDEP_FALSE AMDEPBACKSLASH CCDEPMODE am__fastdepCC_TRUE am__fastdepCC_FALSE CXXFLAGS ac_ct_CXX CXXDEPMODE am__fastdepCXX_TRUE am__fastdepCXX_FALSE build build_cpu build_vendor build_os host host_cpu host_vendor host_os EGREP LN_S ECHO AR ac_ct_AR RANLIB ac_ct_RANLIB CPP CXXCPP F77 FFLAGS ac_ct_F77 LIBTOOL LIBOBJS LTLIBOBJS' +ac_subst_vars='SHELL PATH_SEPARATOR PACKAGE_NAME PACKAGE_TARNAME PACKAGE_VERSION PACKAGE_STRING PACKAGE_BUGREPORT exec_prefix prefix program_transform_name bindir sbindir libexecdir datadir sysconfdir sharedstatedir localstatedir libdir includedir oldincludedir infodir mandir build_alias host_alias target_alias DEFS ECHO_C ECHO_N ECHO_T LIBS INSTALL_PROGRAM INSTALL_SCRIPT INSTALL_DATA CYGPATH_W PACKAGE VERSION ACLOCAL AUTOCONF AUTOMAKE AUTOHEADER MAKEINFO install_sh STRIP ac_ct_STRIP INSTALL_STRIP_PROGRAM mkdir_p AWK SET_MAKE am__leading_dot AMTAR am__tar am__untar MAINTAINER_MODE_TRUE MAINTAINER_MODE_FALSE MAINT AMDIS_DEBUG_TRUE AMDIS_DEBUG_FALSE CXX CC AMDIS_INTEL_TRUE AMDIS_INTEL_FALSE AMDIS_OPENMP_TRUE AMDIS_OPENMP_FALSE OPENMP_FLAG MPI_DIR PETSC_DIR USE_PARALLEL_AMDIS_TRUE USE_PARALLEL_AMDIS_FALSE USE_PARALLEL_DOMAIN_AMDIS_TRUE USE_PARALLEL_DOMAIN_AMDIS_FALSE ENABLE_UMFPACK_TRUE ENABLE_UMFPACK_FALSE ENABLE_MKL_TRUE ENABLE_MKL_FALSE DUNE_DIR ENABLE_DUNE_TRUE ENABLE_DUNE_FALSE ENABLE_BOOST_TRUE ENABLE_BOOST_FALSE CFLAGS LDFLAGS CPPFLAGS ac_ct_CC EXEEXT OBJEXT DEPDIR am__include am__quote AMDEP_TRUE AMDEP_FALSE AMDEPBACKSLASH CCDEPMODE am__fastdepCC_TRUE am__fastdepCC_FALSE CXXFLAGS ac_ct_CXX CXXDEPMODE am__fastdepCXX_TRUE am__fastdepCXX_FALSE build build_cpu build_vendor build_os host host_cpu host_vendor host_os SED EGREP LN_S ECHO AR ac_ct_AR RANLIB ac_ct_RANLIB CPP CXXCPP F77 FFLAGS ac_ct_F77 LIBTOOL LIBOBJS LTLIBOBJS' ac_subst_files='' # Initialize some variables set by options. @@ -3967,6 +3967,7 @@ do done done done +IFS=$as_save_IFS lt_ac_max=0 lt_ac_count=0 # Add /usr/xpg4/bin/sed as it is typically found on Solaris @@ -4001,6 +4002,7 @@ done fi SED=$lt_cv_path_SED + echo "$as_me:$LINENO: result: $SED" >&5 echo "${ECHO_T}$SED" >&6 @@ -4441,7 +4443,7 @@ ia64-*-hpux*) ;; *-*-irix6*) # Find out which ABI we are using. - echo '#line 4444 "configure"' > conftest.$ac_ext + echo '#line 4446 "configure"' > conftest.$ac_ext if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5 (eval $ac_compile) 2>&5 ac_status=$? @@ -5576,7 +5578,7 @@ fi # Provide some information about the compiler. -echo "$as_me:5579:" \ +echo "$as_me:5581:" \ "checking for Fortran 77 compiler version" >&5 ac_compiler=`set X $ac_compile; echo $2` { (eval echo "$as_me:$LINENO: \"$ac_compiler --version </dev/null >&5\"") >&5 @@ -6639,11 +6641,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:6642: $lt_compile\"" >&5) + (eval echo "\"\$as_me:6644: $lt_compile\"" >&5) (eval "$lt_compile" 2>conftest.err) ac_status=$? cat conftest.err >&5 - echo "$as_me:6646: \$? = $ac_status" >&5 + echo "$as_me:6648: \$? = $ac_status" >&5 if (exit $ac_status) && test -s "$ac_outfile"; then # The compiler can only warn and ignore the option if not recognized # So say no if there are warnings other than the usual output. @@ -6907,11 +6909,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:6910: $lt_compile\"" >&5) + (eval echo "\"\$as_me:6912: $lt_compile\"" >&5) (eval "$lt_compile" 2>conftest.err) ac_status=$? cat conftest.err >&5 - echo "$as_me:6914: \$? = $ac_status" >&5 + echo "$as_me:6916: \$? = $ac_status" >&5 if (exit $ac_status) && test -s "$ac_outfile"; then # The compiler can only warn and ignore the option if not recognized # So say no if there are warnings other than the usual output. @@ -7011,11 +7013,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:7014: $lt_compile\"" >&5) + (eval echo "\"\$as_me:7016: $lt_compile\"" >&5) (eval "$lt_compile" 2>out/conftest.err) ac_status=$? cat out/conftest.err >&5 - echo "$as_me:7018: \$? = $ac_status" >&5 + echo "$as_me:7020: \$? = $ac_status" >&5 if (exit $ac_status) && test -s out/conftest2.$ac_objext then # The compiler can only warn and ignore the option if not recognized @@ -8476,10 +8478,31 @@ linux*) # before this can be enabled. hardcode_into_libs=yes + # find out which ABI we are using + libsuff= + case "$host_cpu" in + x86_64*|s390x*|powerpc64*) + echo '#line 8485 "configure"' > conftest.$ac_ext + if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5 + (eval $ac_compile) 2>&5 + ac_status=$? + echo "$as_me:$LINENO: \$? = $ac_status" >&5 + (exit $ac_status); }; then + case `/usr/bin/file conftest.$ac_objext` in + *64-bit*) + libsuff=64 + sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}" + ;; + esac + fi + rm -rf conftest* + ;; + esac + # Append ld.so.conf contents to the search path if test -f /etc/ld.so.conf; then - lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` - sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra" + lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` + sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra" fi # We used to test for /lib/ld.so.1 and disable shared libraries on @@ -9356,7 +9379,7 @@ else lt_dlunknown=0; lt_dlno_uscore=1; lt_dlneed_uscore=2 lt_status=$lt_dlunknown cat > conftest.$ac_ext <<EOF -#line 9359 "configure" +#line 9382 "configure" #include "confdefs.h" #if HAVE_DLFCN_H @@ -9456,7 +9479,7 @@ else lt_dlunknown=0; lt_dlno_uscore=1; lt_dlneed_uscore=2 lt_status=$lt_dlunknown cat > conftest.$ac_ext <<EOF -#line 9459 "configure" +#line 9482 "configure" #include "confdefs.h" #if HAVE_DLFCN_H @@ -9787,6 +9810,9 @@ CC=$lt_compiler # Is the compiler the GNU C compiler? with_gcc=$GCC +gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\` +gcc_ver=\`gcc -dumpversion\` + # An ERE matcher. EGREP=$lt_EGREP @@ -9920,11 +9946,11 @@ striplib=$lt_striplib # Dependencies to place before the objects being linked to create a # shared library. -predep_objects=$lt_predep_objects +predep_objects=\`echo $lt_predep_objects | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects=$lt_postdep_objects +postdep_objects=\`echo $lt_postdep_objects | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place before the objects being linked to create a # shared library. @@ -9936,7 +9962,7 @@ postdeps=$lt_postdeps # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path=$lt_compiler_lib_search_path +compiler_lib_search_path=\`echo $lt_compiler_lib_search_path | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Method to check whether dependent libraries are shared objects. deplibs_check_method=$lt_deplibs_check_method @@ -10016,7 +10042,7 @@ variables_saved_for_relink="$variables_saved_for_relink" link_all_deplibs=$link_all_deplibs # Compile-time system search path for libraries -sys_lib_search_path_spec=$lt_sys_lib_search_path_spec +sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Run-time system search path for libraries sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec @@ -11796,11 +11822,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:11799: $lt_compile\"" >&5) + (eval echo "\"\$as_me:11825: $lt_compile\"" >&5) (eval "$lt_compile" 2>conftest.err) ac_status=$? cat conftest.err >&5 - echo "$as_me:11803: \$? = $ac_status" >&5 + echo "$as_me:11829: \$? = $ac_status" >&5 if (exit $ac_status) && test -s "$ac_outfile"; then # The compiler can only warn and ignore the option if not recognized # So say no if there are warnings other than the usual output. @@ -11900,11 +11926,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:11903: $lt_compile\"" >&5) + (eval echo "\"\$as_me:11929: $lt_compile\"" >&5) (eval "$lt_compile" 2>out/conftest.err) ac_status=$? cat out/conftest.err >&5 - echo "$as_me:11907: \$? = $ac_status" >&5 + echo "$as_me:11933: \$? = $ac_status" >&5 if (exit $ac_status) && test -s out/conftest2.$ac_objext then # The compiler can only warn and ignore the option if not recognized @@ -12432,10 +12458,31 @@ linux*) # before this can be enabled. hardcode_into_libs=yes + # find out which ABI we are using + libsuff= + case "$host_cpu" in + x86_64*|s390x*|powerpc64*) + echo '#line 12465 "configure"' > conftest.$ac_ext + if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5 + (eval $ac_compile) 2>&5 + ac_status=$? + echo "$as_me:$LINENO: \$? = $ac_status" >&5 + (exit $ac_status); }; then + case `/usr/bin/file conftest.$ac_objext` in + *64-bit*) + libsuff=64 + sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}" + ;; + esac + fi + rm -rf conftest* + ;; + esac + # Append ld.so.conf contents to the search path if test -f /etc/ld.so.conf; then - lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` - sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra" + lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` + sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra" fi # We used to test for /lib/ld.so.1 and disable shared libraries on @@ -12819,6 +12866,9 @@ CC=$lt_compiler_CXX # Is the compiler the GNU C compiler? with_gcc=$GCC_CXX +gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\` +gcc_ver=\`gcc -dumpversion\` + # An ERE matcher. EGREP=$lt_EGREP @@ -12952,11 +13002,11 @@ striplib=$lt_striplib # Dependencies to place before the objects being linked to create a # shared library. -predep_objects=$lt_predep_objects_CXX +predep_objects=\`echo $lt_predep_objects_CXX | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects=$lt_postdep_objects_CXX +postdep_objects=\`echo $lt_postdep_objects_CXX | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place before the objects being linked to create a # shared library. @@ -12968,7 +13018,7 @@ postdeps=$lt_postdeps_CXX # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path=$lt_compiler_lib_search_path_CXX +compiler_lib_search_path=\`echo $lt_compiler_lib_search_path_CXX | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Method to check whether dependent libraries are shared objects. deplibs_check_method=$lt_deplibs_check_method @@ -13048,7 +13098,7 @@ variables_saved_for_relink="$variables_saved_for_relink" link_all_deplibs=$link_all_deplibs_CXX # Compile-time system search path for libraries -sys_lib_search_path_spec=$lt_sys_lib_search_path_spec +sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Run-time system search path for libraries sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec @@ -13470,11 +13520,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:13473: $lt_compile\"" >&5) + (eval echo "\"\$as_me:13523: $lt_compile\"" >&5) (eval "$lt_compile" 2>conftest.err) ac_status=$? cat conftest.err >&5 - echo "$as_me:13477: \$? = $ac_status" >&5 + echo "$as_me:13527: \$? = $ac_status" >&5 if (exit $ac_status) && test -s "$ac_outfile"; then # The compiler can only warn and ignore the option if not recognized # So say no if there are warnings other than the usual output. @@ -13574,11 +13624,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:13577: $lt_compile\"" >&5) + (eval echo "\"\$as_me:13627: $lt_compile\"" >&5) (eval "$lt_compile" 2>out/conftest.err) ac_status=$? cat out/conftest.err >&5 - echo "$as_me:13581: \$? = $ac_status" >&5 + echo "$as_me:13631: \$? = $ac_status" >&5 if (exit $ac_status) && test -s out/conftest2.$ac_objext then # The compiler can only warn and ignore the option if not recognized @@ -15019,10 +15069,31 @@ linux*) # before this can be enabled. hardcode_into_libs=yes + # find out which ABI we are using + libsuff= + case "$host_cpu" in + x86_64*|s390x*|powerpc64*) + echo '#line 15076 "configure"' > conftest.$ac_ext + if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5 + (eval $ac_compile) 2>&5 + ac_status=$? + echo "$as_me:$LINENO: \$? = $ac_status" >&5 + (exit $ac_status); }; then + case `/usr/bin/file conftest.$ac_objext` in + *64-bit*) + libsuff=64 + sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}" + ;; + esac + fi + rm -rf conftest* + ;; + esac + # Append ld.so.conf contents to the search path if test -f /etc/ld.so.conf; then - lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` - sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra" + lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` + sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra" fi # We used to test for /lib/ld.so.1 and disable shared libraries on @@ -15406,6 +15477,9 @@ CC=$lt_compiler_F77 # Is the compiler the GNU C compiler? with_gcc=$GCC_F77 +gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\` +gcc_ver=\`gcc -dumpversion\` + # An ERE matcher. EGREP=$lt_EGREP @@ -15539,11 +15613,11 @@ striplib=$lt_striplib # Dependencies to place before the objects being linked to create a # shared library. -predep_objects=$lt_predep_objects_F77 +predep_objects=\`echo $lt_predep_objects_F77 | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects=$lt_postdep_objects_F77 +postdep_objects=\`echo $lt_postdep_objects_F77 | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place before the objects being linked to create a # shared library. @@ -15555,7 +15629,7 @@ postdeps=$lt_postdeps_F77 # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path=$lt_compiler_lib_search_path_F77 +compiler_lib_search_path=\`echo $lt_compiler_lib_search_path_F77 | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Method to check whether dependent libraries are shared objects. deplibs_check_method=$lt_deplibs_check_method @@ -15635,7 +15709,7 @@ variables_saved_for_relink="$variables_saved_for_relink" link_all_deplibs=$link_all_deplibs_F77 # Compile-time system search path for libraries -sys_lib_search_path_spec=$lt_sys_lib_search_path_spec +sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Run-time system search path for libraries sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec @@ -15777,11 +15851,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:15780: $lt_compile\"" >&5) + (eval echo "\"\$as_me:15854: $lt_compile\"" >&5) (eval "$lt_compile" 2>conftest.err) ac_status=$? cat conftest.err >&5 - echo "$as_me:15784: \$? = $ac_status" >&5 + echo "$as_me:15858: \$? = $ac_status" >&5 if (exit $ac_status) && test -s "$ac_outfile"; then # The compiler can only warn and ignore the option if not recognized # So say no if there are warnings other than the usual output. @@ -16045,11 +16119,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:16048: $lt_compile\"" >&5) + (eval echo "\"\$as_me:16122: $lt_compile\"" >&5) (eval "$lt_compile" 2>conftest.err) ac_status=$? cat conftest.err >&5 - echo "$as_me:16052: \$? = $ac_status" >&5 + echo "$as_me:16126: \$? = $ac_status" >&5 if (exit $ac_status) && test -s "$ac_outfile"; then # The compiler can only warn and ignore the option if not recognized # So say no if there are warnings other than the usual output. @@ -16149,11 +16223,11 @@ else -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \ -e 's:$: $lt_compiler_flag:'` - (eval echo "\"\$as_me:16152: $lt_compile\"" >&5) + (eval echo "\"\$as_me:16226: $lt_compile\"" >&5) (eval "$lt_compile" 2>out/conftest.err) ac_status=$? cat out/conftest.err >&5 - echo "$as_me:16156: \$? = $ac_status" >&5 + echo "$as_me:16230: \$? = $ac_status" >&5 if (exit $ac_status) && test -s out/conftest2.$ac_objext then # The compiler can only warn and ignore the option if not recognized @@ -17614,10 +17688,31 @@ linux*) # before this can be enabled. hardcode_into_libs=yes + # find out which ABI we are using + libsuff= + case "$host_cpu" in + x86_64*|s390x*|powerpc64*) + echo '#line 17695 "configure"' > conftest.$ac_ext + if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5 + (eval $ac_compile) 2>&5 + ac_status=$? + echo "$as_me:$LINENO: \$? = $ac_status" >&5 + (exit $ac_status); }; then + case `/usr/bin/file conftest.$ac_objext` in + *64-bit*) + libsuff=64 + sys_lib_search_path_spec="/lib${libsuff} /usr/lib${libsuff} /usr/local/lib${libsuff}" + ;; + esac + fi + rm -rf conftest* + ;; + esac + # Append ld.so.conf contents to the search path if test -f /etc/ld.so.conf; then - lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` - sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra" + lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '` + sys_lib_dlsearch_path_spec="/lib${libsuff} /usr/lib${libsuff} $lt_ld_extra" fi # We used to test for /lib/ld.so.1 and disable shared libraries on @@ -18001,6 +18096,9 @@ CC=$lt_compiler_GCJ # Is the compiler the GNU C compiler? with_gcc=$GCC_GCJ +gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\` +gcc_ver=\`gcc -dumpversion\` + # An ERE matcher. EGREP=$lt_EGREP @@ -18134,11 +18232,11 @@ striplib=$lt_striplib # Dependencies to place before the objects being linked to create a # shared library. -predep_objects=$lt_predep_objects_GCJ +predep_objects=\`echo $lt_predep_objects_GCJ | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects=$lt_postdep_objects_GCJ +postdep_objects=\`echo $lt_postdep_objects_GCJ | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place before the objects being linked to create a # shared library. @@ -18150,7 +18248,7 @@ postdeps=$lt_postdeps_GCJ # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path=$lt_compiler_lib_search_path_GCJ +compiler_lib_search_path=\`echo $lt_compiler_lib_search_path_GCJ | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Method to check whether dependent libraries are shared objects. deplibs_check_method=$lt_deplibs_check_method @@ -18230,7 +18328,7 @@ variables_saved_for_relink="$variables_saved_for_relink" link_all_deplibs=$link_all_deplibs_GCJ # Compile-time system search path for libraries -sys_lib_search_path_spec=$lt_sys_lib_search_path_spec +sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Run-time system search path for libraries sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec @@ -18482,6 +18580,9 @@ CC=$lt_compiler_RC # Is the compiler the GNU C compiler? with_gcc=$GCC_RC +gcc_dir=\`gcc -print-file-name=. | $SED 's,/\.$,,'\` +gcc_ver=\`gcc -dumpversion\` + # An ERE matcher. EGREP=$lt_EGREP @@ -18615,11 +18716,11 @@ striplib=$lt_striplib # Dependencies to place before the objects being linked to create a # shared library. -predep_objects=$lt_predep_objects_RC +predep_objects=\`echo $lt_predep_objects_RC | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects=$lt_postdep_objects_RC +postdep_objects=\`echo $lt_postdep_objects_RC | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Dependencies to place before the objects being linked to create a # shared library. @@ -18631,7 +18732,7 @@ postdeps=$lt_postdeps_RC # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path=$lt_compiler_lib_search_path_RC +compiler_lib_search_path=\`echo $lt_compiler_lib_search_path_RC | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Method to check whether dependent libraries are shared objects. deplibs_check_method=$lt_deplibs_check_method @@ -18711,7 +18812,7 @@ variables_saved_for_relink="$variables_saved_for_relink" link_all_deplibs=$link_all_deplibs_RC # Compile-time system search path for libraries -sys_lib_search_path_spec=$lt_sys_lib_search_path_spec +sys_lib_search_path_spec=\`echo $lt_sys_lib_search_path_spec | \$SED -e "s@\${gcc_dir}@\\\${gcc_dir}@g;s@\${gcc_ver}@\\\${gcc_ver}@g"\` # Run-time system search path for libraries sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec @@ -19635,6 +19736,7 @@ s,@host@,$host,;t t s,@host_cpu@,$host_cpu,;t t s,@host_vendor@,$host_vendor,;t t s,@host_os@,$host_os,;t t +s,@SED@,$SED,;t t s,@EGREP@,$EGREP,;t t s,@LN_S@,$LN_S,;t t s,@ECHO@,$ECHO,;t t diff --git a/AMDiS/libtool b/AMDiS/libtool index aab8ab33..2f043c9f 100755 --- a/AMDiS/libtool +++ b/AMDiS/libtool @@ -93,6 +93,9 @@ CC="gcc" # Is the compiler the GNU C compiler? with_gcc=yes +gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'` +gcc_ver=`gcc -dumpversion` + # An ERE matcher. EGREP="grep -E" @@ -229,11 +232,11 @@ striplib="strip --strip-unneeded" # Dependencies to place before the objects being linked to create a # shared library. -predep_objects="" +predep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects="" +postdep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Dependencies to place before the objects being linked to create a # shared library. @@ -245,7 +248,7 @@ postdeps="" # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path="" +compiler_lib_search_path=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Method to check whether dependent libraries are shared objects. deplibs_check_method="pass_all" @@ -325,7 +328,7 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM link_all_deplibs=unknown # Compile-time system search path for libraries -sys_lib_search_path_spec=" /u/witkowski/local/lib/i386-redhat-linux/4.1.2/ /u/witkowski/local/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" +sys_lib_search_path_spec=`echo " /u/witkowski/local/lib/i386-redhat-linux/4.1.2/ /u/witkowski/local/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Run-time system search path for libraries sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib " @@ -6809,6 +6812,9 @@ CC="g++" # Is the compiler the GNU C compiler? with_gcc=yes +gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'` +gcc_ver=`gcc -dumpversion` + # An ERE matcher. EGREP="grep -E" @@ -6942,11 +6948,11 @@ striplib="strip --strip-unneeded" # Dependencies to place before the objects being linked to create a # shared library. -predep_objects="/usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crti.o /usr/lib/gcc/i386-redhat-linux/4.1.2/crtbeginS.o" +predep_objects=`echo "/usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crti.o /usr/lib/gcc/i386-redhat-linux/4.1.2/crtbeginS.o" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects="/usr/lib/gcc/i386-redhat-linux/4.1.2/crtendS.o /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crtn.o" +postdep_objects=`echo "/usr/lib/gcc/i386-redhat-linux/4.1.2/crtendS.o /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../crtn.o" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Dependencies to place before the objects being linked to create a # shared library. @@ -6958,7 +6964,7 @@ postdeps="-lstdc++ -lm -lgcc_s -lc -lgcc_s" # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path="-L/u/witkowski/local/lib -L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2/../../.." +compiler_lib_search_path=`echo "-L/u/witkowski/local/lib -L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2 -L/usr/lib/gcc/i386-redhat-linux/4.1.2/../../.." | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Method to check whether dependent libraries are shared objects. deplibs_check_method="pass_all" @@ -7038,7 +7044,7 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM link_all_deplibs=unknown # Compile-time system search path for libraries -sys_lib_search_path_spec=" /u/witkowski/local/lib/i386-redhat-linux/4.1.2/ /u/witkowski/local/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" +sys_lib_search_path_spec=`echo " /u/witkowski/local/lib/i386-redhat-linux/4.1.2/ /u/witkowski/local/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../i386-redhat-linux/4.1.2/ /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../ /lib/i386-redhat-linux/4.1.2/ /lib/ /usr/lib/i386-redhat-linux/4.1.2/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Run-time system search path for libraries sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib " @@ -7114,6 +7120,9 @@ CC="g77" # Is the compiler the GNU C compiler? with_gcc=yes +gcc_dir=`gcc -print-file-name=. | /bin/sed 's,/\.$,,'` +gcc_ver=`gcc -dumpversion` + # An ERE matcher. EGREP="grep -E" @@ -7250,11 +7259,11 @@ striplib="strip --strip-unneeded" # Dependencies to place before the objects being linked to create a # shared library. -predep_objects="" +predep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Dependencies to place after the objects being linked to create a # shared library. -postdep_objects="" +postdep_objects=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Dependencies to place before the objects being linked to create a # shared library. @@ -7266,7 +7275,7 @@ postdeps="" # The library search path used internally by the compiler when linking # a shared library. -compiler_lib_search_path="" +compiler_lib_search_path=`echo "" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Method to check whether dependent libraries are shared objects. deplibs_check_method="pass_all" @@ -7346,7 +7355,7 @@ variables_saved_for_relink="PATH LD_LIBRARY_PATH LD_RUN_PATH GCC_EXEC_PREFIX COM link_all_deplibs=unknown # Compile-time system search path for libraries -sys_lib_search_path_spec=" /u/witkowski/local/lib/i386-redhat-linux/3.4.6/ /u/witkowski/local/lib/ /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../ /lib/i386-redhat-linux/3.4.6/ /lib/ /usr/lib/i386-redhat-linux/3.4.6/ /usr/lib/" +sys_lib_search_path_spec=`echo " /u/witkowski/local/lib/i386-redhat-linux/3.4.6/ /u/witkowski/local/lib/ /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../../i386-redhat-linux/lib/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../i386-redhat-linux/3.4.6/ /usr/lib/gcc/i386-redhat-linux/3.4.6/../../../ /lib/i386-redhat-linux/3.4.6/ /lib/ /usr/lib/i386-redhat-linux/3.4.6/ /usr/lib/" | $SED -e "s@${gcc_dir}@\${gcc_dir}@g;s@${gcc_ver}@\${gcc_ver}@g"` # Run-time system search path for libraries sys_lib_dlsearch_path_spec="/lib /usr/lib /usr/lib/octave-2.9.9 /usr/lib/qt-3.3/lib /usr/lib/qt4/lib " diff --git a/AMDiS/src/ElInfo3d.cc b/AMDiS/src/ElInfo3d.cc index 928d9aa3..87d40103 100644 --- a/AMDiS/src/ElInfo3d.cc +++ b/AMDiS/src/ElInfo3d.cc @@ -131,28 +131,24 @@ namespace AMDiS { TEST_EXIT_DBG(dimOfWorld == 3) ("dim != dim_of_world ! use parametric elements!\n"); - WorldVector<double> *e1 = &tmpWorldVecs[0]; - WorldVector<double> *e2 = &tmpWorldVecs[1]; - WorldVector<double> *e3 = &tmpWorldVecs[2]; - WorldVector<double> *v0 = &tmpWorldVecs[3]; - - double det, adet; - double a11, a12, a13, a21, a22, a23, a31, a32, a33; + std::vector<double> &e1 = tmpWorldVecs[0]; + std::vector<double> &e2 = tmpWorldVecs[1]; + std::vector<double> &e3 = tmpWorldVecs[2]; testFlag(Mesh::FILL_COORDS); - *v0 = coord[0]; for (int i = 0; i < 3; i++) { - (*e1)[i] = coord[1][i] - (*v0)[i]; - (*e2)[i] = coord[2][i] - (*v0)[i]; - (*e3)[i] = coord[3][i] - (*v0)[i]; + e1[i] = coord[1][i] - coord[0][i]; + e2[i] = coord[2][i] - coord[0][i]; + e3[i] = coord[3][i] - coord[0][i]; } - det = (*e1)[0] * ((*e2)[1] * (*e3)[2] - (*e2)[2] * (*e3)[1]) - - (*e1)[1] * ((*e2)[0] * (*e3)[2] - (*e2)[2] * (*e3)[0]) - + (*e1)[2] * ((*e2)[0] * (*e3)[1] - (*e2)[1] * (*e3)[0]); + double det = + e1[0] * (e2[1] * e3[2] - e2[2] * e3[1]) - + e1[1] * (e2[0] * e3[2] - e2[2] * e3[0]) + + e1[2] * (e2[0] * e3[1] - e2[1] * e3[0]); - adet = abs(det); + double adet = abs(det); if (adet < 1.0E-25) { MSG("abs(det) = %f\n",adet); @@ -161,25 +157,17 @@ namespace AMDiS { grd_lam[i][j] = 0.0; } else { det = 1.0 / det; - a11 = ((*e2)[1] * (*e3)[2] - (*e2)[2] * (*e3)[1]) * det; /* (a_ij) = A^{-T} */ - a12 = ((*e2)[2] * (*e3)[0] - (*e2)[0] * (*e3)[2]) * det; - a13 = ((*e2)[0] * (*e3)[1] - (*e2)[1] * (*e3)[0]) * det; - a21 = ((*e1)[2] * (*e3)[1] - (*e1)[1] * (*e3)[2]) * det; - a22 = ((*e1)[0] * (*e3)[2] - (*e1)[2] * (*e3)[0]) * det; - a23 = ((*e1)[1] * (*e3)[0] - (*e1)[0] * (*e3)[1]) * det; - a31 = ((*e1)[1] * (*e2)[2] - (*e1)[2] * (*e2)[1]) * det; - a32 = ((*e1)[2] * (*e2)[0] - (*e1)[0] * (*e2)[2]) * det; - a33 = ((*e1)[0] * (*e2)[1] - (*e1)[1] * (*e2)[0]) * det; - - grd_lam[1][0] = a11; - grd_lam[1][1] = a12; - grd_lam[1][2] = a13; - grd_lam[2][0] = a21; - grd_lam[2][1] = a22; - grd_lam[2][2] = a23; - grd_lam[3][0] = a31; - grd_lam[3][1] = a32; - grd_lam[3][2] = a33; + /* (a_ij) = A^{-T} */ + + grd_lam[1][0] = (e2[1] * e3[2] - e2[2] * e3[1]) * det; + grd_lam[1][1] = (e2[2] * e3[0] - e2[0] * e3[2]) * det; + grd_lam[1][2] = (e2[0] * e3[1] - e2[1] * e3[0]) * det; + grd_lam[2][0] = (e1[2] * e3[1] - e1[1] * e3[2]) * det; + grd_lam[2][1] = (e1[0] * e3[2] - e1[2] * e3[0]) * det; + grd_lam[2][2] = (e1[1] * e3[0] - e1[0] * e3[1]) * det; + grd_lam[3][0] = (e1[1] * e2[2] - e1[2] * e2[1]) * det; + grd_lam[3][1] = (e1[2] * e2[0] - e1[0] * e2[2]) * det; + grd_lam[3][2] = (e1[0] * e2[1] - e1[1] * e2[0]) * det; grd_lam[0][0] = -grd_lam[1][0] - grd_lam[2][0] - grd_lam[3][0]; grd_lam[0][1] = -grd_lam[1][1] - grd_lam[2][1] - grd_lam[3][1]; @@ -329,9 +317,7 @@ namespace AMDiS { double det = 0.0; - WorldVector<double> *e0 = &tmpWorldVecs[0]; - WorldVector<double> *e1 = &tmpWorldVecs[1]; - WorldVector<double> *e2 = &tmpWorldVecs[2]; + WorldVector<double> e0, e1, e2; if (dimOfWorld == 3) { int i0 = (face + 1) % 4; @@ -339,14 +325,14 @@ namespace AMDiS { int i2 = (face + 3) % 4; for (int i = 0; i < dimOfWorld; i++) { - (*e0)[i] = coord[i1][i] - coord[i0][i]; - (*e1)[i] = coord[i2][i] - coord[i0][i]; - (*e2)[i] = coord[face][i] - coord[i0][i]; + e0[i] = coord[i1][i] - coord[i0][i]; + e1[i] = coord[i2][i] - coord[i0][i]; + e2[i] = coord[face][i] - coord[i0][i]; } - vectorProduct(*e0, *e1, normal); + vectorProduct(e0, e1, normal); - if ((*e2 * normal) < 0.0) + if ((e2 * normal) < 0.0) for (int i = 0; i < dimOfWorld; i++) normal[i] = -normal[i]; @@ -360,7 +346,7 @@ namespace AMDiS { MSG("not implemented for DIM_OF_WORLD = %d in 3d\n", dimOfWorld); } - return(det); + return det; } diff --git a/AMDiS/src/ElInfo3d.h b/AMDiS/src/ElInfo3d.h index e3ac0a2e..cf2ab06a 100644 --- a/AMDiS/src/ElInfo3d.h +++ b/AMDiS/src/ElInfo3d.h @@ -38,7 +38,9 @@ namespace AMDiS { ElInfo3d(Mesh* aMesh) : ElInfo(aMesh) { - tmpWorldVecs.resize(4); + tmpWorldVecs.resize(3); + for (int i = 0; i < 3; i++) + tmpWorldVecs[i].resize(3); } /// Assignment operator @@ -92,7 +94,7 @@ namespace AMDiS { signed char orientation; /// Tmp vectors used for calculations in calcGrdLambda and getNormal(). - std::vector< WorldVector<double> > tmpWorldVecs; + std::vector< std::vector<double> > tmpWorldVecs; static double mat_d1_left_val[4][4]; static mtl::dense2D<double> mat_d1_left; -- GitLab