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Commit 6b0d1620 authored by Stenger, Florian's avatar Stenger, Florian
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namespace Vtk engulfs all

parent c66bd4cd
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dune/vtk/CMakeLists.txt
View file @ 6b0d1620
dune_add_library("vtktypes" OBJECT
vtktypes.cc)
types.cc)
#install headers
install(FILES
......@@ -8,20 +8,22 @@ install(FILES
defaultvtkfunction.hh
filereader.hh
filewriter.hh
forward.hh
gridcreatorinterface.hh
legacyvtkfunction.hh
pvdwriter.hh
pvdwriter.impl.hh
vtkfunction.hh
vtklocalfunction.hh
vtklocalfunctioninterface.hh
vtkreader.hh
vtkreader.impl.hh
vtktimeserieswriter.hh
vtktimeserieswriter.impl.hh
vtktypes.hh
vtkwriter.hh
vtkwriterinterface.hh
vtkwriterinterface.impl.hh
function.hh
localfunction.hh
localfunctioninterface.hh
reader.hh
reader.impl.hh
timeserieswriter.hh
timeserieswriter.impl.hh
types.hh
writer.hh
writerinterface.hh
writerinterface.impl.hh
DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}/dune/vtkwriter)
add_subdirectory(datacollectors)
......
dune/vtk/datacollectorinterface.hh
View file @ 6b0d1620
......@@ -5,6 +5,10 @@
namespace Dune
{
namespace Vtk
{
/// Base class for data collectors in a CRTP style.
/**
* \tparam GridViewType Model of Dune::GridView
......@@ -129,6 +133,7 @@ namespace Dune
GridView gridView_;
};
} // end namespace Vtk
} // end namespace Dune
#include "datacollectorinterface.impl.hh"
dune/vtk/datacollectorinterface.impl.hh
View file @ 6b0d1620
......@@ -2,13 +2,17 @@
#include <dune/geometry/referenceelements.hh>
namespace Dune {
namespace Dune
{
namespace Vtk
{
template <class GV, class D, class P>
template <class GV, class D, class P>
template <class T, class VtkFunction>
std::vector<T> DataCollectorInterface<GV,D,P>
std::vector<T> DataCollectorInterface<GV,D,P>
::cellDataImpl (VtkFunction const& fct) const
{
{
std::vector<T> data;
data.reserve(this->numCells() * fct.ncomps());
......@@ -21,6 +25,7 @@ std::vector<T> DataCollectorInterface<GV,D,P>
localFct.unbind();
}
return data;
}
}
} // end namespace Vtk
} // end namespace Dune
dune/vtk/datacollectors/continuousdatacollector.hh
View file @ 6b0d1620
......@@ -7,26 +7,29 @@
#include <dune/grid/utility/globalindexset.hh>
#include <dune/vtk/forward.hh>
#include <dune/vtk/vtktypes.hh>
#include <dune/vtk/types.hh>
#include "unstructureddatacollector.hh"
namespace Dune
{
/// Implementation of \ref DataCollector for linear cells, with continuous data.
template <class GridView, class Partition>
class ContinuousDataCollector
namespace Vtk
{
/// Implementation of \ref DataCollector for linear cells, with continuous data.
template <class GridView, class Partition>
class ContinuousDataCollector
: public UnstructuredDataCollectorInterface<GridView, ContinuousDataCollector<GridView,Partition>, Partition>
{
{
using Self = ContinuousDataCollector;
using Super = UnstructuredDataCollectorInterface<GridView, Self, Partition>;
public:
public:
using Super::dim;
using Super::partition;
public:
public:
ContinuousDataCollector (GridView const& gridView)
: Super(gridView)
{}
......@@ -136,11 +139,12 @@ public:
return data;
}
protected:
protected:
using Super::gridView_;
std::uint64_t numPoints_ = 0;
std::uint64_t numCells_ = 0;
std::vector<std::int64_t> indexMap_;
};
};
} // end namespace Vtk
} // end namespace Dune
dune/vtk/datacollectors/discontinuousdatacollector.hh
View file @ 6b0d1620
......@@ -3,26 +3,29 @@
#include <vector>
#include <dune/vtk/forward.hh>
#include <dune/vtk/vtktypes.hh>
#include <dune/vtk/types.hh>
#include "unstructureddatacollector.hh"
namespace Dune
{
/// Implementation of \ref DataCollector for linear cells, with discontinuous data.
template <class GridView, class Partition>
class DiscontinuousDataCollector
namespace Vtk
{
/// Implementation of \ref DataCollector for linear cells, with discontinuous data.
template <class GridView, class Partition>
class DiscontinuousDataCollector
: public UnstructuredDataCollectorInterface<GridView, DiscontinuousDataCollector<GridView,Partition>, Partition>
{
{
using Self = DiscontinuousDataCollector;
using Super = UnstructuredDataCollectorInterface<GridView, Self, Partition>;
public:
public:
using Super::dim;
using Super::partition;
public:
public:
DiscontinuousDataCollector (GridView const& gridView)
: Super(gridView)
{}
......@@ -118,11 +121,12 @@ public:
return data;
}
protected:
protected:
using Super::gridView_;
std::uint64_t numCells_ = 0;
std::uint64_t numPoints_ = 0;
std::vector<std::int64_t> indexMap_;
};
};
} // end namespace Vtk
} // end namespace Dune
dune/vtk/datacollectors/lagrangedatacollector.hh
View file @ 6b0d1620
......@@ -8,27 +8,31 @@
#include <dune/grid/common/partitionset.hh>
#include <dune/vtk/forward.hh>
#include <dune/vtk/vtktypes.hh>
#include <dune/vtk/types.hh>
#include <dune/vtk/utility/lagrangepoints.hh>
#include "unstructureddatacollector.hh"
namespace Dune {
namespace Dune
{
namespace Vtk
{
/// Implementation of \ref DataCollector for lagrange cells
template <class GridView, int ORDER = -1>
class LagrangeDataCollector
/// Implementation of \ref DataCollector for lagrange cells
template <class GridView, int ORDER = -1>
class LagrangeDataCollector
: public UnstructuredDataCollectorInterface<GridView, LagrangeDataCollector<GridView,ORDER>, Partitions::All>
{
{
using Self = LagrangeDataCollector;
using Super = UnstructuredDataCollectorInterface<GridView, Self, Partitions::All>;
public:
public:
static_assert(ORDER != 0, "Order 0 not supported");
using Super::dim;
using Super::partition; // NOTE: lagrange data-collector currently implemented for the All partition only
public:
public:
LagrangeDataCollector (GridView const& gridView, int order = (ORDER < 0 ? 2 : ORDER))
: Super(gridView)
, order_(order)
......@@ -183,14 +187,15 @@ public:
return data;
}
protected:
protected:
using Super::gridView_;
unsigned int order_;
std::uint64_t numPoints_ = 0;
using PointSet = VtkLagrangePointSet<typename GridView::ctype, GridView::dimension>;
using PointSet = LagrangePointSet<typename GridView::ctype, GridView::dimension>;
std::map<GeometryType, PointSet> pointSets_;
};
};
} // end namespace Vtk
} // end namespace Dune
dune/vtk/datacollectors/quadraticdatacollector.hh
View file @ 6b0d1620
......@@ -6,26 +6,29 @@
#include <dune/grid/common/partitionset.hh>
#include <dune/vtk/forward.hh>
#include <dune/vtk/vtktypes.hh>
#include <dune/vtk/types.hh>
#include "unstructureddatacollector.hh"
namespace Dune
{
/// Implementation of \ref DataCollector for quadratic cells, with continuous data.
template <class GridView>
class QuadraticDataCollector
namespace Vtk
{
/// Implementation of \ref DataCollector for quadratic cells, with continuous data.
template <class GridView>
class QuadraticDataCollector
: public UnstructuredDataCollectorInterface<GridView, QuadraticDataCollector<GridView>, Partitions::All>
{
{
using Self = QuadraticDataCollector;
using Super = UnstructuredDataCollectorInterface<GridView, Self, Partitions::All>;
public:
public:
using Super::dim;
using Super::partition; // NOTE: quadratic data-collector currently implemented for the All partition only
public:
public:
QuadraticDataCollector (GridView const& gridView)
: Super(gridView)
{}
......@@ -138,8 +141,9 @@ public:
return data;
}
protected:
protected:
using Super::gridView_;
};
};
} // end namespace Vtk
} // end namespace Dune
dune/vtk/datacollectors/spdatacollector.hh
View file @ 6b0d1620
......@@ -16,22 +16,26 @@
namespace Dune
{
#if HAVE_DUNE_SPGRID
// Specialization for SPGrid
template <class GridView>
class SPDataCollector
namespace Vtk
{
#if HAVE_DUNE_SPGRID
// Specialization for SPGrid
template <class GridView>
class SPDataCollector
: public StructuredDataCollectorInterface<GridView, SPDataCollector<GridView>>
{
{
using Self = SPDataCollector;
using Super = StructuredDataCollectorInterface<GridView, Self>;
using ctype = typename GridView::ctype;
public:
public:
using Super::dim;
using Super::partition;
public:
public:
SPDataCollector (GridView const& gridView)
: Super(gridView)
, wholeExtent_(filledArray<6,int>(0))
......@@ -79,23 +83,25 @@ public:
}
}
protected:
protected:
using Super::gridView_;
std::array<int, 6> wholeExtent_;
std::array<int, 6> extent_;
FieldVector<ctype,3> origin_;
FieldVector<ctype,3> spacing_;
std::vector<std::size_t> indexMap_;
};
};
namespace Impl
{
namespace Impl
{
template <class GridView, class ct, int dim, template< int > class Ref, class Comm>
struct StructuredDataCollectorImpl<GridView, SPGrid<ct,dim,Ref,Comm>>
{
using type = SPDataCollector<GridView>;
};
}
}
#endif // HAVE_DUNE_SPGRID
#endif // HAVE_DUNE_SPGRID
} // end namespace Vtk
} // end namespace Dune
dune/vtk/datacollectors/structureddatacollector.hh
View file @ 6b0d1620
......@@ -12,21 +12,25 @@
namespace Dune
{
/// The Interface for structured data-collectors
template <class GridView, class Derived>
class StructuredDataCollectorInterface
namespace Vtk
{
/// The Interface for structured data-collectors
template <class GridView, class Derived>
class StructuredDataCollectorInterface
: public DataCollectorInterface<GridView, Derived>
{
protected:
{
protected:
using Super = DataCollectorInterface<GridView, Derived>;
using SubDataCollector = ContinuousDataCollector<GridView>;
using ctype = typename GridView::ctype;
public:
public:
using Super::dim;
using Super::partition;
public:
public:
StructuredDataCollectorInterface (GridView const& gridView)
: Super(gridView)
, subDataCollector_(gridView)
......@@ -88,14 +92,14 @@ public:
/// @}
public: // default implementation:
public: // default implementation:
/// \copyref DefaultDataCollector::update.
void updateImpl ()
{
subDataCollector_.update();
#if HAVE_MPI
#if HAVE_MPI
int rank = gridView_.comm().rank();
int numRanks = gridView_.comm().size();
......@@ -107,7 +111,7 @@ public: // default implementation:
}
sendRequest_ = MPI_REQUEST_NULL;
#endif
#endif
}
/// Return number of grid cells
......@@ -146,7 +150,7 @@ public: // default implementation:
{
auto&& extent = this->extent();
#if HAVE_MPI
#if HAVE_MPI
int sendFlag = 0;
MPI_Status sendStatus;
MPI_Test(&sendRequest_, &sendFlag, &sendStatus);
......@@ -159,7 +163,7 @@ public: // default implementation:
extents_[0] = extent;
}
}
#endif
#endif
writer(extent);
}
......@@ -168,7 +172,7 @@ public: // default implementation:
template <class Writer>
void writePiecesImpl (Writer const& writer) const
{
#if HAVE_MPI
#if HAVE_MPI
writer(0, extents_[0], true);
int numRanks = gridView_.comm().size();
......@@ -181,9 +185,9 @@ public: // default implementation:
writer(idx, extents_[idx], true);
}
}
#else
#else
writer(0, this->extent(), true);
#endif
#endif
}
// Origin (0,0,0)
......@@ -222,15 +226,16 @@ public: // default implementation:
return ordinates;
}
protected:
protected:
using Super::gridView_;
SubDataCollector subDataCollector_;
#if HAVE_MPI
#if HAVE_MPI
mutable std::vector<std::array<int,6>> extents_;
mutable std::vector<MPI_Request> requests_;
mutable MPI_Request sendRequest_ = MPI_REQUEST_NULL;
#endif
};
#endif
};
} // end namespace Vtk
} // end namespace Dune
dune/vtk/datacollectors/test/test-lagrangedatacollector.cc
View file @ 6b0d1620
......@@ -71,14 +71,14 @@ void testGridView (std::string prefix, Dune::TestSuite& testSuite, GridView cons
{
// 1. test linear order lagrange data-collector
{
Dune::ContinuousDataCollector<GridView> linearDataCollector(gridView);
Dune::Vtk::ContinuousDataCollector<GridView> linearDataCollector(gridView);
// data collector with template order
Dune::LagrangeDataCollector<GridView, 1> lagrangeDataCollector1a(gridView);
Dune::Vtk::LagrangeDataCollector<GridView, 1> lagrangeDataCollector1a(gridView);
testDataCollector(prefix + "_linear_template", testSuite, lagrangeDataCollector1a, linearDataCollector);
// data collector with runtime order
Dune::LagrangeDataCollector<GridView> lagrangeDataCollector1b(gridView, 1);
Dune::Vtk::LagrangeDataCollector<GridView> lagrangeDataCollector1b(gridView, 1);
testDataCollector(prefix + "_linear_runtime", testSuite, lagrangeDataCollector1b, linearDataCollector);
}
}
......
dune/vtk/datacollectors/unstructureddatacollector.hh
View file @ 6b0d1620
......@@ -6,26 +6,30 @@
#include <dune/vtk/forward.hh>
#include <dune/vtk/datacollectorinterface.hh>
namespace Dune {
struct Cells
namespace Dune
{
namespace Vtk
{
struct Cells
{
std::vector<std::uint8_t> types;
std::vector<std::int64_t> offsets;
std::vector<std::int64_t> connectivity;
};
};
template <class GridView, class Derived, class Partition>
class UnstructuredDataCollectorInterface
template <class GridView, class Derived, class Partition>
class UnstructuredDataCollectorInterface
: public DataCollectorInterface<GridView, Derived, Partition>
{
{
using Super = DataCollectorInterface<GridView, Derived, Partition>;
public:
public:
using Super::dim;
using Super::partition;
public:
public:
UnstructuredDataCollectorInterface (GridView const& gridView)
: Super(gridView)
{}
......@@ -41,15 +45,16 @@ public:
return this->asDerived().pointIdsImpl();
}
protected:
protected:
// default implementation
std::vector<std::uint64_t> pointIdsImpl () const
{
return {};
}
protected:
protected:
using Super::gridView_;
};
};
} // end namespace Vtk
} // end namespace Dune
dune/vtk/datacollectors/yaspdatacollector.hh
View file @ 6b0d1620
......@@ -17,20 +17,24 @@
namespace Dune
{
// Specialization for YaspGrid
template <class GridView>
class YaspDataCollector
namespace Vtk
{
// Specialization for YaspGrid
template <class GridView>
class YaspDataCollector
: public StructuredDataCollectorInterface<GridView, YaspDataCollector<GridView>>
{
{
using Self = YaspDataCollector;
using Super = StructuredDataCollectorInterface<GridView, Self>;
using ctype = typename GridView::ctype;
public:
public:
using Super::dim;
using Super::partition;
public:
public:
YaspDataCollector (GridView const& gridView)
: Super(gridView)
, wholeExtent_(filledArray<6,int>(0))
......@@ -129,7 +133,7 @@ public:
}
private:
private:
template <class G>
using HostGrid = decltype(std::declval<G>().hostGrid());
......@@ -148,22 +152,23 @@ private:
return grid(g.hostGrid());
}
protected:
protected:
using Super::gridView_;
std::array<int, 6> wholeExtent_;
std::array<int, 6> extent_;
FieldVector<ctype,3> origin_;
FieldVector<ctype,3> spacing_;
int level_;
};
};
namespace Impl
{